Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRP | rs145751422 | chr3:99948310 | GAAGA/G | 9.8E-9 | 210 | 16.7 | 18.47 | 4.07 | KM Plot |
KIRP | rs145779824 | chr14:59984728 | A/G | 0.000205 | 213 | 16.43 | 18 | 11.2 | KM Plot |
KIRP | rs145831787 | chr3:50260468 | C/T | 0.000119 | 212 | 14.97 | 19.5 | 7.13 | KM Plot |
KIRP | rs145887322 | chr5:153402535 | T/C | 2.23E-12 | 214 | 14.97 | 18.25 | 5.75 | KM Plot |
KIRP | rs145993441 | chr14:59880351 | A/G | 0.000111 | 213 | 16.43 | 16.53 | 6.63 | KM Plot |
KIRP | rs146048697 | chr21:42672680 | C/T | 0.000336 | 204 | 16.53 | 13.43 | 8.87 | KM Plot |
KIRP | rs146264222 | chr16:47714181 | T/G | 4.08E-9 | 213 | 17.2 | 12.9 | 9.92 | KM Plot |
KIRP | rs146306638 | chr16:20464775 | A/C | 0.000386 | 211 | 16.43 | 13.6 | 5.88 | KM Plot |
KIRP | rs146457367 | chr10:75032100 | CAAATAAAT/C | 4.52E-12 | 214 | 16.53 | 11.77 | 5.6 | KM Plot |
KIRP | rs146501151 | chr10:63491559 | GA/G | 0 | 213 | 18.25 | 6.83 | 3.38 | KM Plot |
KIRP | rs146657952 | chr17:80807777 | T/C | 0.000115 | 208 | 14.87 | 17.2 | 15.15 | KM Plot |
KIRP | rs146701423 | chr14:59998117 | A/G | 0.000251 | 212 | 16.43 | 16.53 | 11.2 | KM Plot |
KIRP | rs146737626 | chr15:24452196 | G/GT | 6.98E-7 | 213 | 15.2 | 20.82 | 9.77 | KM Plot |
KIRP | rs146863150 | chr6:26408472 | C/CATAT | 2.31E-7 | 211 | 16.45 | 15.02 | 9.77 | KM Plot |
KIRP | rs147004308 | chr15:24646811 | C/T | 1.2E-6 | 207 | 15.2 | 20.82 | 9.77 | KM Plot |